Chimera
Maryland CPU-GPU Cluster Infrastructure

Publications

[1] X. Hao and A. Varshney. Geometry-guided computation of 3d electrostatics for large biomolecules. Journal of Computer-aided Geometric Design, 23(6):545-557, 2006. [ bib | DOI | http ]
[2] D. Juba and A. Varshney. Modelling and rendering large volume data with gaussian radial basis functions. 2007. [ bib ]
[3] J. H. Jung and D. P. O'Leary. Cholesky decomposition and linear programming on a gpu. In Workshop on Edge Computing Using New Commodity Architectures (EDGE), Chapel Hill, North Carolina, May 2006. [ bib | .pdf ]
[4] J. H. Jung and D. P. O'Leary. Adaptive constraint reduction for convex quadratic programs, with an application to support vector machines. In Stanford 50: State of the Art and Future Directions of Computational Mathematics and Numerical Computing, March 2007. (poster). [ bib ]
[5] J. H. Jung and D. P. O'Leary. Implementing an interior point method for linear programs on a cpu-gpu system. In Applied Mathematics Principal Investigators Meeting, Lawrence Livermore Laboratory, May 2007. [ bib | .pdf ]
[6] A. Kalaiah and A. Varshney. Statistical geometry representation for efficient transmission and rendering. ACM Transactions on Graphics, 24(2):348-373, April. [ bib ]
[7] J. Kim and J. JaJa. Component-based data layout for efficient slicing of very large multidimensional volumetric data. In 19th International Conference on Statistical and Scientific Database Management, 2007. (accepted). [ bib | DOI | http ]
[8] Y. Kim, C. H. Lee, and A. Varshney. Vertex-transformation streams. Graphical Models, 68(4):371-383, July 2006. [ bib | DOI | .pdf ]
[9] A. O'Donovan, R. Duraiswami, and N. A. Gumerov. Real time capture of audio images and their use with video. In IEEE Workshop on Applications of Signal Processing Audio and Acoustics, 2007. (submitted). [ bib ]
[10] D. P. O'Leary. Parallel matrix computation: From the illiac to quantum computing. In Stanford 50: State of the Art and Future Directions of Computational Mathematics and Numerical Computing, March 2007. invited talk. [ bib | http ]
[11] A. Varshney Q. Wang, J. JaJa. An efficient and scalable parallel algorithm for out-of-core isosurface extraction and rendering. Journal of Parallel and Distributed Computing, 2007. (accepted). [ bib | DOI ]
[12] V. C. Raykar, R. Duraiswami, and B. Krishnapuram. A fast algorithm for learning large scale preference relations. In Proceedings of the Eleventh International Conference on Artificial Intelligence and Statistics, Puerto Rico, March 2007. [ bib | .pdf ]
[13] M. C. Schatz, C. Trapnell, A. L. Delcher, and A. Varshney. High-throughput sequence alignment using graphics processing units. Bioinformatics, 2007. (submitted). [ bib ]
[14] Q. Shi and J. JaJa. Isosurface extraction and spatial filtering using persistent octree. IEEE Transactions on Visualization and Computer Graphics, 12(5), 2006. [ bib | DOI | .pdf ]
[15] Q. Wang and J. JaJa. Interactive high resolution isosurface ray tracing on multi-core processors. In IEEE Visualization, 2007. (submitted). [ bib ]
[16] Q. Wang, J. JaJa, and A. Varshney. An efficient and scalable parallel algorithm for out-of-core isosurface extraction and rendering. In Proceedings of the 20th IEEE International Parallel and Distributed Processing Symposium (IPDPS'06), Rhodes Island, Greece, April 2006. [ bib | .pdf ]