publications.bib

@ARTICLE{schatz2007,
  year = 2007,
  journal = {Bioinformatics},
  title = {High-throughput sequence alignment using Graphics Processing Units},
  author = { M. C. Schatz and C. Trapnell and A. L. Delcher and A. Varshney},
  note = {(submitted)}
}
@ARTICLE{wang2007a,
  author = {Q. Wang, J. JaJa, A. Varshney},
  title = {An Efficient and Scalable Parallel Algorithm for Out-of-Core Isosurface Extraction and Rendering},
  journal = {Journal of Parallel and Distributed Computing},
  year = {2007},
  note = {(accepted)},
  doi = {10.1016/j.jpdc.2006.12.007}
}
@ARTICLE{kalaiah2005,
  author = {A. Kalaiah and A. Varshney},
  title = {Statistical Geometry Representation for Efficient Transmission and Rendering},
  journal = {ACM Transactions on Graphics},
  volume = 24,
  number = 2,
  month = {April},
  pages = {348--373}
}
@ARTICLE{shi2006,
  author = {Q. Shi and J. JaJa},
  title = {Isosurface Extraction and Spatial Filtering Using Persistent Octree},
  journal = {IEEE Transactions on Visualization and Computer Graphics},
  volume = 12,
  number = 5,
  year = 2006,
  url = {http://www.umiacs.umd.edu/research/GPU/papers/pot-vis06-crc.pdf},
  doi = { 10.1109/TVCG.2006.157}
}
@INPROCEEDINGS{wang2007b,
  author = {Q. Wang and J. JaJa},
  title = {Interactive High Resolution Isosurface Ray Tracing on Multi-Core Processors},
  booktitle = {IEEE Visualization},
  year = 2007,
  note = {(submitted)}
}
@INPROCEEDINGS{kim2007,
  author = {J. Kim and J. JaJa},
  title = {Component-based Data Layout for Efficient Slicing of Very Large Multidimensional Volumetric Data},
  booktitle = {19th International Conference on Statistical and Scientific Database Management},
  year = 2007,
  note = {(accepted)},
  url = {http://ieeexplore.ieee.org/xpl/freeabs_all.jsp?isnumber=4274938&arnumber=4274953&count=43&index=14},
  doi = { 	 10.1109/SSDBM.2007.7}
}
@INPROCEEDINGS{wang2006,
  author = {Q. Wang and J. JaJa and A. Varshney },
  title = {An Efficient and Scalable Parallel Algorithm for Out-of-Core Isosurface Extraction and Rendering},
  booktitle = {Proceedings of the 20th IEEE International Parallel and Distributed Processing Symposium (IPDPS'06)},
  month = {April},
  year = 2006,
  address = {Rhodes Island, Greece},
  url = {http://www.umiacs.umd.edu/research/GPU/papers/IPDPS06.pdf}
}
@INPROCEEDINGS{oleary2007,
  author = {D. P. O'Leary},
  title = {Parallel Matrix Computation: From the ILLIAC to Quantum Computing},
  note = {invited talk},
  booktitle = {Stanford 50: State of the Art and Future Directions of Computational Mathematics and Numerical Computing},
  month = {March},
  year = 2007,
  url = {http://compmath50.stanford.edu/schedule/abstracts.php?talk_id=30}
}
@INPROCEEDINGS{jung2007a,
  author = {J. H. Jung and D. P. O'Leary},
  title = {Adaptive constraint reduction for convex quadratic programs, with an application to support vector machines},
  note = {(poster)},
  booktitle = {Stanford 50: State of the Art and Future Directions of Computational Mathematics and Numerical Computing},
  month = {March},
  year = 2007
}
@INPROCEEDINGS{jung2007b,
  author = {J. H. Jung and D. P. O'Leary},
  title = {Implementing an Interior Point Method for Linear Programs on a CPU-GPU system},
  booktitle = {Applied Mathematics Principal Investigators Meeting},
  address = {Lawrence Livermore Laboratory},
  month = {May},
  url = {http://www.umiacs.umd.edu/research/GPU/papers/UMaryland-O'Lea2.pdf},
  year = 2007
}
@INPROCEEDINGS{jung2006,
  author = {J. H. Jung and D. P. O'Leary},
  title = {Cholesky Decomposition and Linear Programming on a GPU},
  booktitle = {Workshop on Edge Computing Using New Commodity Architectures (EDGE)},
  address = {Chapel Hill, North Carolina},
  month = {May},
  url = {http://www.cs.umd.edu/Grad/scholarlypapers/papers/jjung.pdf},
  year = 2006
}
@INPROCEEDINGS{odonovan2007,
  author = {A. O'Donovan and R. Duraiswami and N. A. Gumerov},
  title = {Real Time Capture of Audio Images and Their Use with Video},
  booktitle = {IEEE Workshop on Applications of Signal Processing Audio and Acoustics},
  year = 2007,
  note = {(submitted)}
}
@INPROCEEDINGS{raykar2007,
  author = {V. C. Raykar and R. Duraiswami and B. Krishnapuram},
  title = {A fast algorithm for learning large scale preference relations},
  booktitle = {Proceedings of the Eleventh International Conference on Artificial Intelligence and Statistics},
  address = {Puerto Rico},
  month = {March},
  url = {http://www.umiacs.umd.edu/research/GPU/papers/raykar_AISTATS_2007.pdf},
  year = 2007
}
@ARTICLE{kim2006,
  author = {Y. Kim and C. H. Lee and A. Varshney},
  title = {Vertex-Transformation Streams},
  journal = {Graphical Models},
  volume = 68,
  number = 4,
  month = {July},
  url = {http://www.cs.umd.edu/gvil/papers/vts06.pdf},
  year = 2006,
  pages = {371-383},
  doi = {10.1016/j.gmod.2006.03.005}
}
@ARTICLE{hao2006,
  author = {X. Hao and A. Varshney},
  title = {Geometry-guided Computation of 3D Electrostatics for Large Biomolecules},
  journal = {Journal of Computer-aided Geometric Design},
  volume = 23,
  number = 6,
  year = 2006,
  url = {http://portal.acm.org/citation.cfm?id=1159680},
  doi = {10.1016/j.cagd.2006.04.003},
  pages = {545-557}
}
@INPROCEEDINGS{juba2007,
  author = {D. Juba and A. Varshney},
  title = {Modelling and Rendering Large Volume Data with Gaussian Radial Basis Functions},
  booktitle = {},
  year = 2007
}

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